STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOL6LOW QUALITY PROTEIN: apolipoprotein L6. (344 aa)    
Predicted Functional Partners:
PXT1
Peroxisomal testis-specific protein 1.
      
 0.725
ARHGAP39
Rho GTPase-activating protein 39.
      
 0.724
APOA1
Truncated apolipoprotein A-I; Participates in the reverse transport of cholesterol from tissues to the liver for excretion by promoting cholesterol efflux from tissues and by acting as a cofactor for the lecithin cholesterol acyltransferase (LCAT). As part of the SPAP complex, activates spermatozoa motility; Belongs to the apolipoprotein A1/A4/E family.
    
 0.621
TST
Sulfurtransferase.
      
 0.619
AVEN
Cell death regulator Aven.
      
 0.618
APOA4
Apolipoprotein A-IV.
    
 0.564
CUL7
Cullin-7; Belongs to the cullin family.
    
 
 0.529
NCF4
Neutrophil cytosol factor 4.
    
 
 0.526
LOC101382712
Uncharacterized protein LOC101382712.
      
 0.522
SRPR
Signal recognition particle receptor subunit alpha isoform X1.
      
 0.522
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.