STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101369499LOW QUALITY PROTEIN: cysteine-rich PDZ-binding protein-like. (103 aa)    
Predicted Functional Partners:
ARMC7
Armadillo repeat-containing protein 7 isoform X1.
    
 
 0.637
PHF5A
PHD finger-like domain-containing protein 5A.
   
   0.598
SF3B3
Splicing factor 3B subunit 3.
    
   0.580
SF3B1
Splicing factor 3B subunit 1 isoform X1.
    
   0.580
PRPF8
pre-mRNA-processing-splicing factor 8.
    
   0.580
SF3B2
Splicing factor 3B subunit 2 isoform X1.
    
   0.580
DLG4
Disks large homolog 4 isoform X1; Belongs to the MAGUK family.
    
 
 0.533
PSMD5
26S proteasome non-ATPase regulatory subunit 5 isoform X1.
      
 0.523
TMED2
Transmembrane emp24 domain-containing protein 2 isoform X1.
      
 0.522
LOC101375942
RING finger protein 113A-like.
    
   0.520
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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