STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105758394LOW QUALITY PROTEIN: uncharacterized protein LOC105758394. (351 aa)    
Predicted Functional Partners:
FANCM
Fanconi anemia group M protein.
    
 0.765
LOC105757205
LOW QUALITY PROTEIN: uncharacterized protein LOC105757205.
 
     0.528
GIN1
Gypsy retrotransposon integrase-like protein 1 isoform X1.
      
 0.522
CENPT
Centromere protein T.
    
 0.471
LIN52
Protein lin-52 homolog isoform X1.
    
 0.450
RPA1
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
    
 0.436
LIN9
Protein lin-9 homolog isoform X1.
    
 0.433
LOC105758174
LOW QUALITY PROTEIN: endogenous retrovirus group K member 18 Pol protein-like.
  
     0.418
LOC101368674
LOW QUALITY PROTEIN: uncharacterized protein LOC101368674.
  
     0.414
LOC105758243
LOW QUALITY PROTEIN: endogenous retrovirus group K member 18 Pol protein-like.
  
     0.411
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.