STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101368228Uncharacterized protein LOC101368228; Belongs to the calycin superfamily. Lipocalin family. (337 aa)    
Predicted Functional Partners:
LOC101363256
Epididymal-specific lipocalin-9; Belongs to the calycin superfamily. Lipocalin family.
   
 
 0.567
LCN8
Epididymal-specific lipocalin-8; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.551
TMEM141
Transmembrane protein 141.
      
 0.522
LCNL1
LOW QUALITY PROTEIN: lipocalin-like 1 protein; Belongs to the calycin superfamily. Lipocalin family.
      
0.521
CDC73
Parafibromin.
   
 0.499
PAF1
RNA polymerase II-associated factor 1 homolog isoform X1.
   
 0.464
C8B
Complement component C8 beta chain.
   
 0.455
FAM174B
Membrane protein FAM174B.
      
 0.450
XXYLT1
Xyloside xylosyltransferase 1.
      
 0.446
LCN12
Epididymal-specific lipocalin-12; Belongs to the calycin superfamily. Lipocalin family.
      
 0.446
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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