Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFT32897.1 | SFT33189.1 | SAMN02910356_00006 | SAMN02910356_00035 | DNA-directed RNA polymerase subunit omega. | DNA mismatch repair protein MutL. | 0.611 |
SFT32897.1 | SFT33541.1 | SAMN02910356_00006 | SAMN02910356_00065 | DNA-directed RNA polymerase subunit omega. | DNA polymerase I. | 0.435 |
SFT32897.1 | SFT39832.1 | SAMN02910356_00006 | SAMN02910356_00455 | DNA-directed RNA polymerase subunit omega. | Type I restriction enzyme, R subunit. | 0.876 |
SFT32897.1 | SFT52664.1 | SAMN02910356_00006 | SAMN02910356_00907 | DNA-directed RNA polymerase subunit omega. | SNF2 family N-terminal domain-containing protein. | 0.878 |
SFT32897.1 | rpoA | SAMN02910356_00006 | SAMN02910356_01463 | DNA-directed RNA polymerase subunit omega. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.997 |
SFT32897.1 | rpoB | SAMN02910356_00006 | SAMN02910356_02567 | DNA-directed RNA polymerase subunit omega. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.990 |
SFT32897.1 | rpoC | SAMN02910356_00006 | SAMN02910356_02566 | DNA-directed RNA polymerase subunit omega. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.977 |
SFT33189.1 | SFT32897.1 | SAMN02910356_00035 | SAMN02910356_00006 | DNA mismatch repair protein MutL. | DNA-directed RNA polymerase subunit omega. | 0.611 |
SFT33189.1 | SFT33541.1 | SAMN02910356_00035 | SAMN02910356_00065 | DNA mismatch repair protein MutL. | DNA polymerase I. | 0.942 |
SFT33189.1 | SFT39809.1 | SAMN02910356_00035 | SAMN02910356_00454 | DNA mismatch repair protein MutL. | Type I restriction enzyme M protein. | 0.454 |
SFT33189.1 | SFT39832.1 | SAMN02910356_00035 | SAMN02910356_00455 | DNA mismatch repair protein MutL. | Type I restriction enzyme, R subunit. | 0.845 |
SFT33189.1 | SFT52664.1 | SAMN02910356_00035 | SAMN02910356_00907 | DNA mismatch repair protein MutL. | SNF2 family N-terminal domain-containing protein. | 0.853 |
SFT33189.1 | rpoB | SAMN02910356_00035 | SAMN02910356_02567 | DNA mismatch repair protein MutL. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.527 |
SFT33541.1 | SFT32897.1 | SAMN02910356_00065 | SAMN02910356_00006 | DNA polymerase I. | DNA-directed RNA polymerase subunit omega. | 0.435 |
SFT33541.1 | SFT33189.1 | SAMN02910356_00065 | SAMN02910356_00035 | DNA polymerase I. | DNA mismatch repair protein MutL. | 0.942 |
SFT33541.1 | SFT39792.1 | SAMN02910356_00065 | SAMN02910356_00453 | DNA polymerase I. | Type I restriction enzyme, S subunit. | 0.467 |
SFT33541.1 | SFT39832.1 | SAMN02910356_00065 | SAMN02910356_00455 | DNA polymerase I. | Type I restriction enzyme, R subunit. | 0.898 |
SFT33541.1 | SFT52664.1 | SAMN02910356_00065 | SAMN02910356_00907 | DNA polymerase I. | SNF2 family N-terminal domain-containing protein. | 0.888 |
SFT33541.1 | SFT82863.1 | SAMN02910356_00065 | SAMN02910356_02308 | DNA polymerase I. | Type I restriction enzyme, S subunit. | 0.467 |
SFT33541.1 | rpoA | SAMN02910356_00065 | SAMN02910356_01463 | DNA polymerase I. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.515 |
page 1 of 4