STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT57867.1Nucleotidyl transferase AbiEii toxin, Type IV TA system. (289 aa)    
Predicted Functional Partners:
SFT57853.1
Transcriptional regulator, AbiEi antitoxin, Type IV TA system.
 
   
 0.980
SFT57881.1
Hypothetical protein.
       0.742
SFT57899.1
Hypothetical protein.
       0.727
SFT57915.1
UDP-galactopyranose mutase.
       0.727
SFT57836.1
Sugar phosphate isomerase/epimerase.
 
     0.633
SFT40820.1
Hypothetical protein.
 
     0.599
SFT57946.1
mRNA interferase RelE/StbE.
       0.569
SFT57821.1
Sugar phosphate isomerase/epimerase.
       0.558
SFT57931.1
Hypothetical protein.
       0.553
SFT57805.1
Death on curing protein.
       0.541
Your Current Organism:
Selenomonas ruminantium
NCBI taxonomy Id: 971
Other names: ATCC 12561, Ancyromonas ruminantium, CGMCC 1.2721, DSM 2150, JCM 6583, S. ruminantium, Selenomastix ruminantium, Spirillum ruminantium, strain GA-192, strain GA192
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.