STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT59816.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (230 aa)    
Predicted Functional Partners:
SFT59797.1
Heavy metal sensor kinase.
 
 0.992
SFT54370.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 0.968
SFT75785.1
Signal transduction histidine kinase.
 
 0.945
SFT79711.1
HAMP domain-containing protein.
 
 0.943
SFT38531.1
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
 
 0.940
SFT63788.1
Signal transduction histidine kinase.
 
 0.915
SFT53205.1
PAS domain S-box-containing protein.
 
 0.912
SFT74362.1
Two-component system, chemotaxis family, response regulator CheV.
  
 
 0.806
SFT35757.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
0.796
SFT37074.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
0.796
Your Current Organism:
Selenomonas ruminantium
NCBI taxonomy Id: 971
Other names: ATCC 12561, Ancyromonas ruminantium, CGMCC 1.2721, DSM 2150, JCM 6583, S. ruminantium, Selenomastix ruminantium, Spirillum ruminantium, strain GA-192, strain GA192
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