STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT71682.1Radical SAM-linked protein/radical SAM family uncharacterized protein. (871 aa)    
Predicted Functional Partners:
SFT71695.1
Ribonuclease G.
 
     0.805
rodA
Rod shape determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
  
    0.689
minE
Cell division topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
       0.631
SFT71639.1
Septum site-determining protein MinD.
       0.626
SFT74135.1
Hypothetical protein.
  
    0.617
SFT71623.1
Septum site-determining protein MinC.
       0.615
SFT71607.1
Penicillin-binding protein 2.
       0.603
SFT37852.1
Oxygen-independent coproporphyrinogen-3 oxidase.
  
  
 0.563
SFT81150.1
Oxygen-independent coproporphyrinogen-3 oxidase.
  
  
 0.563
SFT71595.1
Rod shape-determining protein MreD.
 
     0.541
Your Current Organism:
Selenomonas ruminantium
NCBI taxonomy Id: 971
Other names: ATCC 12561, Ancyromonas ruminantium, CGMCC 1.2721, DSM 2150, JCM 6583, S. ruminantium, Selenomastix ruminantium, Spirillum ruminantium, strain GA-192, strain GA192
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.