STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT76941.1D-methionine transport system permease protein. (217 aa)    
Predicted Functional Partners:
SFT76922.1
D-methionine transport system substrate-binding protein; Belongs to the nlpA lipoprotein family.
 
 0.999
metN
D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
  
  0.997
SFT49586.1
D-methionine transport system substrate-binding protein.
  
 0.987
SFT60191.1
D-methionine transport system ATP-binding protein.
     0.867
SFT60155.1
D-methionine transport system substrate-binding protein.
  
 0.856
SFT37194.1
DNA-binding transcriptional regulator, MarR family.
  
  
 0.539
SFT40690.1
DNA-binding transcriptional regulator, MarR family.
  
  
 0.539
SFT62196.1
MarR family transcriptional regulator, transcriptional regulator for hemolysin.
  
  
 0.539
SFT74777.1
DNA-binding transcriptional regulator, MarR family.
  
  
 0.539
SFT85435.1
DNA-binding transcriptional regulator, MarR family.
  
  
 0.539
Your Current Organism:
Selenomonas ruminantium
NCBI taxonomy Id: 971
Other names: ATCC 12561, Ancyromonas ruminantium, CGMCC 1.2721, DSM 2150, JCM 6583, S. ruminantium, Selenomastix ruminantium, Spirillum ruminantium, strain GA-192, strain GA192
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