STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGK1Phosphoglycerate kinase. (417 aa)    
Predicted Functional Partners:
TPI1
Triosephosphate isomerase.
 
 0.997
LOC102740821
Glyceraldehyde-3-phosphate dehydrogenase-like; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
 0.979
PGAM2
Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
   
 0.972
BPGM
Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
   
 0.971
GAPDHS
Glyceraldehyde-3-phosphate dehydrogenase.
 
 0.971
LOC102739837
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.957
ENO1
Alpha-enolase isoform X2.
  
 0.956
ENO3
Beta-enolase isoform X1.
  
 0.956
LOC102740002
Glyceraldehyde-3-phosphate dehydrogenase.
 
 0.934
CSTF3
Cleavage stimulation factor subunit 3.
  
 
 0.930
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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