STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD13CAnkyrin repeat domain-containing protein 13C. (514 aa)    
Predicted Functional Partners:
UBA52
ubiquitin-60S ribosomal protein L40 isoform X3.
    
   0.533
SMIM7
Small integral membrane protein 7.
      
 0.487
LOC102736811
UPF0556 protein C19orf10 homolog.
      
 0.474
ALX1
ALX homeobox protein 1.
      
 0.473
AP1M1
AP-1 complex subunit mu-1 isoform X1; Belongs to the adaptor complexes medium subunit family.
      
 0.473
TYW3
tRNA wybutosine-synthesizing protein 3 homolog.
      
 0.473
LOC102748663
ADP-ribosylation factor-like protein 5A-like; Belongs to the small GTPase superfamily. Arf family.
      
 0.471
LOC102742105
ADP-ribosylation factor-like protein 5A-like; Belongs to the small GTPase superfamily. Arf family.
      
 0.471
UBP1
Upstream-binding protein 1 isoform X2.
      
 0.451
ZBTB21
Zinc finger and BTB domain-containing protein 21 isoform X1.
   
  
 0.416
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.