STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102727161Protein FAM98A-like. (517 aa)    
Predicted Functional Partners:
DDX1
ATP-dependent RNA helicase DDX1.
   
 
 0.965
LOC102734487
Ashwin isoform X1.
      
 0.769
NUFIP2
Nuclear fragile X mental retardation-interacting protein 2.
    
 
 0.766
HNRNPUL2
Heterogeneous nuclear ribonucleoprotein U-like protein 2.
      
 0.746
ELAVL1
ELAV-like protein; Belongs to the RRM elav family.
      
 0.699
DHX36
Probable ATP-dependent RNA helicase DHX36 isoform X1.
   
  
 0.695
DHX15
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like.
      
 0.686
PRPF3
U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1.
   
  
 0.660
ELAVL3
ELAV-like protein; Belongs to the RRM elav family.
      
 0.651
ELAVL4
ELAV-like protein; Belongs to the RRM elav family.
      
 0.648
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.