STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IGFBPL1Insulin-like growth factor-binding protein-like 1. (172 aa)    
Predicted Functional Partners:
LIX1
Protein limb expression 1 homolog.
   
    0.694
FREM3
LOW QUALITY PROTEIN: FRAS1-related extracellular matrix protein 3.
      
 0.539
SOGA1
Protein SOGA1.
      
 0.487
LOC102743879
LOW QUALITY PROTEIN: riboflavin kinase-like.
      
 0.483
SNED1
Sushi, nidogen and EGF-like domain-containing protein 1.
      
 0.482
ERP27
Endoplasmic reticulum resident protein 27.
      
 0.474
SH3RF1
E3 ubiquitin-protein ligase SH3RF1.
      
 0.472
METTL12
Methyltransferase-like protein 12, mitochondrial.
      
 0.472
LOC102729984
Uncharacterized protein C1orf109 homolog.
   
    0.463
IGF2
Insulin-like growth factor II.
    
 
 0.417
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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