STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOBEC4Putative C->U-editing enzyme APOBEC-4. (371 aa)    
Predicted Functional Partners:
A1CF
APOBEC1 complementation factor.
     
 0.731
LOC102746559
Apolipoprotein B-100-like.
      
 0.616
RBM47
RNA-binding protein 47 isoform X1.
     
 0.574
DUSP14
Dual specificity protein phosphatase 14; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
      
 0.489
DNALI1
LOW QUALITY PROTEIN: dynein, axonemal, light intermediate chain 1.
      
 0.475
ADAT2
tRNA-specific adenosine deaminase 2.
      
 0.474
LOC102738851
tRNA-specific adenosine deaminase 2-like.
      
 0.474
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.