STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KBTBD3Kelch repeat and BTB domain-containing protein 3. (548 aa)    
Predicted Functional Partners:
ZC3H12C
Probable ribonuclease ZC3H12C.
   
  
 0.701
SIKE1
Suppressor of IKBKE 1 isoform X1.
      
 0.670
CHMP2A
Charged multivesicular body protein 2a isoform X1.
      
 0.641
EGFL7
Epidermal growth factor-like protein 7.
    
 
 0.636
BBS1
Bardet-Biedl syndrome 1 protein.
    
 0.608
NEU1
Sialidase-1.
      
 0.543
CUL1
Cullin-1; Belongs to the cullin family.
    
 0.531
BBS7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
   
 0.508
RNF39
RING finger protein 39.
    
 
 0.508
LOC102750416
Uncharacterized protein LOC102750416.
      
 0.504
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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