STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102731442methylmalonyl-CoA epimerase, mitochondrial-like. (185 aa)    
Predicted Functional Partners:
PCCB
propionyl-CoA carboxylase beta chain, mitochondrial.
  
 
 0.956
PCCA
propionyl-CoA carboxylase alpha chain, mitochondrial.
  
 
 0.951
ECHDC1
ethylmalonyl-CoA decarboxylase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
 0.915
MUT
methylmalonyl-CoA mutase, mitochondrial.
  
 
 0.909
LOC102748342
methylmalonyl-CoA mutase, mitochondrial-like.
  
 
 0.899
SDHD
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.
   
  
 0.844
FDX1L
Adrenodoxin-like protein, mitochondrial.
   
 
 0.816
ESD
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
  
 
 0.812
LOC102746216
Hydroxysteroid dehydrogenase-like protein 2-like isoform X1.
  
 
 0.811
SDHC
Succinate dehydrogenase cytochrome b560 subunit, mitochondrial isoform X1.
   
  
 0.811
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.