STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CALRCalreticulin. (417 aa)    
Predicted Functional Partners:
HSP90B1
Endoplasmin isoform X1.
   
 0.999
LOC102743896
Thioredoxin; Belongs to the thioredoxin family.
   
 0.998
LOC102733223
Protein disulfide-isomerase A3-like; Belongs to the protein disulfide isomerase family.
   
 0.997
PDIA4
Protein disulfide-isomerase A4.
   
 0.986
P4HB
Protein disulfide-isomerase.
   
 0.982
CANX
Calnexin isoform X1.
   
0.981
HSPA5
78 kDa glucose-regulated protein isoform X2; Belongs to the heat shock protein 70 family.
   
 0.977
PDIA6
Protein disulfide-isomerase A6; Belongs to the protein disulfide isomerase family.
   
 0.970
LOC102733853
Antigen peptide transporter 2-like.
   
 0.931
ANKRD45
LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein 45.
   
 0.921
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.