STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMBIM4Protein lifeguard 4; Belongs to the BI1 family. (238 aa)    
Predicted Functional Partners:
LEMD3
Inner nuclear membrane protein Man1 isoform X1.
      
 0.717
ZNF23
Zinc finger protein 23 isoform X1.
      
 0.678
LOC102736765
Interleukin-1 receptor-associated kinase 3-like.
      
 0.624
MEPE
Matrix extracellular phosphoglycoprotein isoform X1.
      
 0.621
DEFB129
LOW QUALITY PROTEIN: beta-defensin 129.
      
 0.581
SGSM3
Small G protein signaling modulator 3.
      
 0.581
TMEM150A
Transmembrane protein 150A.
      
 0.580
LOC102748651
Solute carrier family 25 member 44-like; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.579
TM4SF20
Transmembrane 4 L6 family member 20.
      
 0.569
ZSCAN2
Zinc finger and SCAN domain-containing protein 2.
      
 0.541
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.