STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFDN1Prefoldin subunit 1. (122 aa)    
Predicted Functional Partners:
LOC102735561
Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family.
   
 0.999
PFDN5
Prefoldin subunit 5 isoform X1.
   
 0.999
PFDN2
Prefoldin subunit 2.
   
 0.999
PDCD5
Programmed cell death protein 5.
   
    0.854
LOC102729936
T-complex protein 1 subunit alpha-like.
   
 0.852
CCT3
T-complex protein 1 subunit gamma.
   
 0.840
HYPK
Huntingtin-interacting protein K.
   
  
 0.794
MRPL13
39S ribosomal protein L13, mitochondrial; Belongs to the universal ribosomal protein uL13 family.
   
    0.754
CCT2
T-complex protein 1 subunit beta.
   
 0.672
LOC102730835
T-complex protein 1 subunit beta-like.
   
 0.672
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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