STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB3IPrab-3A-interacting protein isoform X1. (472 aa)    
Predicted Functional Partners:
LOC102737793
Ras-related protein Rab-8A-like.
    
 0.980
RAB11B
Ras-related protein Rab-11B.
    
 0.978
LOC102737845
Ras-related protein Rab-11A-like.
    
 0.933
BBS1
Bardet-Biedl syndrome 1 protein.
    
 0.857
RAB39B
Ras-related protein Rab-39B.
    
 0.849
EXOC6
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
    
 0.845
EXOC6B
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
    
 0.844
RAB10
Ras-related protein Rab-10.
    
 0.839
RAB15
Ras-related protein Rab-15.
    
 0.839
RAB13
Ras-related protein Rab-13.
    
 0.839
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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