STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX4Probable ATP-dependent RNA helicase DDX4 isoform X1; Belongs to the DEAD box helicase family. (729 aa)    
Predicted Functional Partners:
RANBP9
Ran-binding protein 9.
    
 
 0.999
SYCP3
Synaptonemal complex protein 3 isoform X1.
   
 
 0.786
STRA8
Stimulated by retinoic acid gene 8 protein homolog.
      
 0.769
DAZL
Deleted in azoospermia-like.
   
 0.765
PIWIL2
Piwi-like protein 2; Belongs to the argonaute family.
   
 0.756
CDC5L
Cell division cycle 5-like protein isoform X1.
    
 0.706
LOC102730244
Putative helicase Mov10l1-like.
    
 0.702
LOC102739685
Probable ATP-dependent RNA helicase DDX41-like.
 
  
  0.693
ASZ1
Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1 isoform X1.
    
 0.691
CDCA8
Borealin.
   
 
 0.691
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.