Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BRIX1 | DDX27 | A0A2U3XVV7 | A0A2U3XKA8 | Ribosome biogenesis protein BRX1 homolog. | Probable ATP-dependent RNA helicase DDX27; Belongs to the DEAD box helicase family. | 0.690 |
| BRIX1 | GTPBP4 | A0A2U3XVV7 | A0A2U3XIK8 | Ribosome biogenesis protein BRX1 homolog. | Nucleolar GTP-binding protein 1. | 0.996 |
| BRIX1 | KRR1 | A0A2U3XVV7 | A0A2U3X9X6 | Ribosome biogenesis protein BRX1 homolog. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.920 |
| BRIX1 | NIFK | A0A2U3XVV7 | A0A2U3XX29 | Ribosome biogenesis protein BRX1 homolog. | MKI67 FHA domain-interacting nucleolar phosphoprotein. | 0.998 |
| BRIX1 | NOB1 | A0A2U3XVV7 | A0A2U3XF74 | Ribosome biogenesis protein BRX1 homolog. | RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. | 0.891 |
| BRIX1 | RPF2 | A0A2U3XVV7 | A0A2U3XVQ0 | Ribosome biogenesis protein BRX1 homolog. | Ribosome production factor 2 homolog. | 0.983 |
| BRIX1 | RRP8 | A0A2U3XVV7 | A0A2U3XMW1 | Ribosome biogenesis protein BRX1 homolog. | Ribosomal RNA-processing protein 8; Essential component of the eNoSC (energy-dependent nucleolar silencing) complex, a complex that mediates silencing of rDNA in response to intracellular energy status and acts by recruiting histone- modifying enzymes. The eNoSC complex is able to sense the energy status of cell: upon glucose starvation, elevation of NAD(+)/NADP(+) ratio activates SIRT1, leading to histone H3 deacetylation followed by dimethylation of H3 at 'Lys-9' (H3K9me2) by SUV39H1 and the formation of silent chromatin in the rDNA locus. In the complex, RRP8 binds to H3K9me2 and pr [...] | 0.884 |
| BRIX1 | UTP23 | A0A2U3XVV7 | A0A2U3XSB5 | Ribosome biogenesis protein BRX1 homolog. | rRNA-processing protein UTP23 homolog. | 0.828 |
| DDX27 | BRIX1 | A0A2U3XKA8 | A0A2U3XVV7 | Probable ATP-dependent RNA helicase DDX27; Belongs to the DEAD box helicase family. | Ribosome biogenesis protein BRX1 homolog. | 0.690 |
| DDX27 | GTPBP4 | A0A2U3XKA8 | A0A2U3XIK8 | Probable ATP-dependent RNA helicase DDX27; Belongs to the DEAD box helicase family. | Nucleolar GTP-binding protein 1. | 0.919 |
| DDX27 | KRR1 | A0A2U3XKA8 | A0A2U3X9X6 | Probable ATP-dependent RNA helicase DDX27; Belongs to the DEAD box helicase family. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.920 |
| DDX27 | NIFK | A0A2U3XKA8 | A0A2U3XX29 | Probable ATP-dependent RNA helicase DDX27; Belongs to the DEAD box helicase family. | MKI67 FHA domain-interacting nucleolar phosphoprotein. | 0.976 |
| DDX27 | NOB1 | A0A2U3XKA8 | A0A2U3XF74 | Probable ATP-dependent RNA helicase DDX27; Belongs to the DEAD box helicase family. | RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. | 0.671 |
| DDX27 | RPF2 | A0A2U3XKA8 | A0A2U3XVQ0 | Probable ATP-dependent RNA helicase DDX27; Belongs to the DEAD box helicase family. | Ribosome production factor 2 homolog. | 0.948 |
| DDX27 | RRP8 | A0A2U3XKA8 | A0A2U3XMW1 | Probable ATP-dependent RNA helicase DDX27; Belongs to the DEAD box helicase family. | Ribosomal RNA-processing protein 8; Essential component of the eNoSC (energy-dependent nucleolar silencing) complex, a complex that mediates silencing of rDNA in response to intracellular energy status and acts by recruiting histone- modifying enzymes. The eNoSC complex is able to sense the energy status of cell: upon glucose starvation, elevation of NAD(+)/NADP(+) ratio activates SIRT1, leading to histone H3 deacetylation followed by dimethylation of H3 at 'Lys-9' (H3K9me2) by SUV39H1 and the formation of silent chromatin in the rDNA locus. In the complex, RRP8 binds to H3K9me2 and pr [...] | 0.931 |
| DDX27 | UTP23 | A0A2U3XKA8 | A0A2U3XSB5 | Probable ATP-dependent RNA helicase DDX27; Belongs to the DEAD box helicase family. | rRNA-processing protein UTP23 homolog. | 0.653 |
| GTPBP4 | BRIX1 | A0A2U3XIK8 | A0A2U3XVV7 | Nucleolar GTP-binding protein 1. | Ribosome biogenesis protein BRX1 homolog. | 0.996 |
| GTPBP4 | DDX27 | A0A2U3XIK8 | A0A2U3XKA8 | Nucleolar GTP-binding protein 1. | Probable ATP-dependent RNA helicase DDX27; Belongs to the DEAD box helicase family. | 0.919 |
| GTPBP4 | KRR1 | A0A2U3XIK8 | A0A2U3X9X6 | Nucleolar GTP-binding protein 1. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.821 |
| GTPBP4 | NIFK | A0A2U3XIK8 | A0A2U3XX29 | Nucleolar GTP-binding protein 1. | MKI67 FHA domain-interacting nucleolar phosphoprotein. | 0.997 |
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