STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXA6Homeobox protein Hox-A6. (233 aa)    
Predicted Functional Partners:
HOXB7
Homeobox protein Hox-B7.
   
 
0.719
HOXA7
Homeobox protein Hox-A7.
   
 
0.706
HOXD3
Homeobox protein Hox-D3.
   
  
0.701
HOXB5
Homeobox protein Hox-B5.
   
 
0.699
HOXC4
Homeobox protein Hox-C4 isoform X2.
   
 
0.674
HOXB4
Homeobox protein Hox-B4.
   
 
0.599
LOC102730965
Homeobox protein Hox-B6-like.
   
  
0.599
HOXC6
Homeobox protein Hox-C6 isoform X1.
   
  
0.573
HOXC5
Homeobox protein Hox-C5.
   
  
0.563
HOXD4
Homeobox protein Hox-D4.
    
 
0.553
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.