STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFNB59Pejvakin. (352 aa)    
Predicted Functional Partners:
STRC
Stereocilin-like.
      
 0.695
SCAF11
Protein SCAF11 isoform X1.
      
 0.676
SSFA2
Sperm-specific antigen 2 isoform X1.
      
 0.654
CPSF3L
Integrator complex subunit 11 isoform X1.
      
 0.645
SHH
Sonic hedgehog protein-like.
      
 0.594
INTS1
Integrator complex subunit 1.
      
 0.545
PLS1
Plastin-1.
     
 0.534
GRXCR2
Glutaredoxin domain-containing cysteine-rich protein 2.
     
 0.525
LOC102748022
Xin actin-binding repeat-containing protein 2-like.
     
 0.505
KCNQ4
Potassium voltage-gated channel subfamily KQT member 4; Belongs to the potassium channel family.
      
 0.501
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.