STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHIC1Cysteine-rich hydrophobic domain 1 protein isoform X1. (222 aa)    
Predicted Functional Partners:
CDX4
Homeobox protein CDX-4.
 
    
 0.696
WASF3
wiskott-Aldrich syndrome protein family member 3-like.
      
 0.696
CHID1
Chitinase domain-containing protein 1.
      
 0.657
RLIM
E3 ubiquitin-protein ligase RLIM isoform X3.
      
 0.651
NAP1L2
Nucleosome assembly protein 1-like 2; Belongs to the nucleosome assembly protein (NAP) family.
      
 0.638
HIC1
Hypermethylated in cancer 1 protein.
      
 0.636
LOC102750440
Cellular nucleic acid-binding protein-like.
      
 0.592
LOC102735641
Protein YIPF.
      
 0.586
ZMYM3
Zinc finger MYM-type protein 3 isoform X1.
      
 0.582
LCMT2
Leucine carboxyl methyltransferase 2.
      
 0.572
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.