STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELAVL1ELAV-like protein; Belongs to the RRM elav family. (326 aa)    
Predicted Functional Partners:
LOC102746125
LOW QUALITY PROTEIN: cyclin-A1-like; Belongs to the cyclin family.
   
 
 0.913
CCND1
G1/S-specific cyclin-D1; Belongs to the cyclin family.
     
 0.905
PRKAA1
Non-specific serine/threonine protein kinase.
     
 0.901
DHX15
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like.
   
 
 0.803
LOC102744816
Heterogeneous nuclear ribonucleoprotein C-like isoform X1.
   
 0.772
SRSF1
Serine/arginine-rich splicing factor 1 isoform X1.
   
 
 0.764
HNRNPU
Heterogeneous nuclear ribonucleoprotein U isoform X1.
   
 
 0.764
ILF2
Interleukin enhancer-binding factor 2.
   
 
 0.757
TRA2B
Transformer-2 protein homolog beta.
  
 0.733
HNRNPM
Heterogeneous nuclear ribonucleoprotein M isoform X1.
   
 
0.732
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.