STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMC9lisH domain-containing protein ARMC9. (665 aa)    
Predicted Functional Partners:
DPH5
Diphthine synthase isoform X1.
      
 0.700
CCDC135
Coiled-coil domain-containing protein lobo homolog.
      
 0.696
ENOSF1
Mitochondrial enolase superfamily member 1 isoform X1.
      
 0.667
RBM46
Probable RNA-binding protein 46 isoform X1.
      
 0.614
ZNF687
Zinc finger protein 687.
      
 0.581
GXYLT1
Glucoside xylosyltransferase 1 isoform X1.
      
 0.557
RIT1
GTP-binding protein Rit1.
      
 0.553
SPDYC
Speedy protein C.
      
 0.552
LOC102727937
Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2-like.
      
 0.545
CATSPER4
Cation channel sperm-associated protein 4.
      
 0.541
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.