STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC9Tetratricopeptide repeat protein 9A. (130 aa)    
Predicted Functional Partners:
ADM5
LOW QUALITY PROTEIN: putative adrenomedullin-5-like protein.
      
 0.648
RASEF
Ras and EF-hand domain-containing protein.
   
  
 0.647
HSP90AB1
Heat shock protein HSP 90-beta.
   
 0.600
LOC102726367
Heat shock protein HSP 90-alpha-like.
   
 0.600
OTOGL
Otogelin-like protein.
   
 
 0.514
LOC102739551
Uncharacterized protein C6orf132 homolog.
    
 
 0.507
LRRC56
Leucine-rich repeat-containing protein 56.
   
 
 0.505
FAM196B
Protein FAM196B.
    
 
 0.493
LRRC14B
Leucine-rich repeat-containing protein 14B.
      
 0.489
LOC102734718
Olfactory receptor.
      
 0.487
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.