STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CXXC1cpG-binding protein isoform X2. (655 aa)    
Predicted Functional Partners:
LOC102730119
set1/Ash2 histone methyltransferase complex subunit ASH2-like.
   
 0.991
DPY30
Protein dpy-30 homolog isoform X1.
    
 0.968
LOC102739262
Histone-lysine N-methyltransferase SETD1A-like.
   
 0.932
SETD1A
Histone-lysine N-methyltransferase SETD1A-like.
   
 0.932
PIH1D1
PIH1 domain-containing protein 1 isoform X1.
   
  
 0.892
FKBP6
Peptidylprolyl isomerase.
     
 0.795
LOC102744859
SWI/SNF complex subunit SMARCC2-like.
   
 
 0.789
SMARCD3
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3.
   
 
 0.770
LOC102729806
WD repeat-containing protein 5-like.
   
 
 0.759
UBA52
ubiquitin-60S ribosomal protein L40 isoform X3.
    
   0.740
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.