STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH3RF3SH3 domain-containing RING finger protein 3. (599 aa)    
Predicted Functional Partners:
UBA52
ubiquitin-60S ribosomal protein L40 isoform X3.
    
  0.834
LOC102742652
Activated CDC42 kinase 1-like isoform X3.
    
 
 0.798
PDLIM1
PDZ and LIM domain protein 1.
    
 0.790
VTA1
Vacuolar protein sorting-associated protein VTA1 homolog isoform X1.
    
   0.742
ZHX3
Zinc fingers and homeoboxes protein 3.
    
 
 0.716
LOC102746898
Protein GREB1-like.
      
 0.715
GCH1
GTP cyclohydrolase 1.
    
   0.696
ARHGAP31
Rho GTPase-activating protein 31.
   
  
 0.690
LOC102728200
ubiquitin-40S ribosomal protein S27a-like.
    
  0.690
LOC102747337
ubiquitin-40S ribosomal protein S27a-like.
    
  0.690
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.