STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIAA0907UPF0469 protein KIAA0907 homolog. (614 aa)    
Predicted Functional Partners:
EFCAB12
EF-hand calcium-binding domain-containing protein 12.
      
 0.549
TMEM180
Transmembrane protein 180.
      
 0.491
LUC7L3
Luc7-like protein 3 isoform X1.
   
  
 0.471
LOC102749010
Ubiquinol-cytochrome-c reductase complex assembly factor 1-like isoform X2.
      
 0.470
SIKE1
Suppressor of IKBKE 1 isoform X1.
      
 0.451
LOC102749559
Putative RNA-binding protein Luc7-like 1-like.
   
  
 0.407
PRR3
Proline-rich protein 3 isoform X1.
    
 
 0.402
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.