STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STXBP5Syntaxin-binding protein 5 isoform X1. (1152 aa)    
Predicted Functional Partners:
STX4
Syntaxin-4; Belongs to the syntaxin family.
    
 0.831
LOC102737493
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.826
PRKCZ
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.790
PRKCI
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.790
SNAP23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
    
 
 0.772
STX1A
syntaxin-1A; Belongs to the syntaxin family.
    
 0.723
STX3
Syntaxin-3; Belongs to the syntaxin family.
    
 0.697
STX11
Syntaxin-11; Belongs to the syntaxin family.
    
 0.693
VTI1A
Vesicle transport through interaction with t-SNAREs homolog 1A.
    
 0.638
MYRIP
Rab effector MyRIP.
      
 0.630
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.