STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CA5BCarbonic anhydrase 5B, mitochondrial; Belongs to the alpha-carbonic anhydrase family. (278 aa)    
Predicted Functional Partners:
RPF2
Ribosome production factor 2 homolog.
   
 
 0.640
LOC102749028
Uncharacterized protein C17orf67 homolog.
      
 0.633
LOC102728803
Phosphate carrier protein, mitochondrial-like; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.581
GRWD1
Glutamate-rich WD repeat-containing protein 1.
   
  
 0.580
GTPBP4
Nucleolar GTP-binding protein 1.
   
    0.548
NOC2L
Nucleolar complex protein 2 homolog.
   
    0.543
WDR36
WD repeat-containing protein 36.
   
    0.543
RRP12
RRP12-like protein.
   
    0.539
LOC102744248
Notchless protein homolog 1-like.
   
  
 0.536
NGDN
Neuroguidin.
   
    0.523
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.