STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102737793Ras-related protein Rab-8A-like. (207 aa)    
Predicted Functional Partners:
RILPL2
RILP-like protein 2.
    
 
 0.999
MICAL2
Protein-methionine sulfoxide oxidase MICAL2.
   
 0.999
RAB3IP
rab-3A-interacting protein isoform X1.
    
 0.980
GDI2
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.905
SMCR8
smith-Magenis syndrome chromosomal region candidate gene 8 protein.
    
 0.901
LOC102740077
Optineurin-like.
     
 0.890
PLK1
Serine/threonine-protein kinase PLK.
    
 0.880
SLC2A4
Solute carrier family 2, facilitated glucose transporter member 4 isoform X1; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
    
 0.878
RABIF
Guanine nucleotide exchange factor MSS4.
    
 
 0.872
LOC102739096
Protein C9orf72 homolog.
    
 0.845
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
Server load: low (30%) [HD]