STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102737492Paired mesoderm homeobox protein 1-like. (245 aa)    
Predicted Functional Partners:
SRF
Serum response factor.
    
 0.618
MAK
Serine/threonine-protein kinase MAK isoform X1.
   
    0.607
ARX
Homeobox protein ARX.
     
0.547
CCDC177
Coiled-coil domain-containing protein 177.
      
 0.544
HRCT1
Histidine-rich carboxyl terminus protein 1.
      
 0.543
SOST
Sclerostin.
   
 
 0.511
MB21D1
Cyclic GMP-AMP synthase.
    
 
 0.500
BGLAP
Osteocalcin; Binds strongly to apatite and calcium.
      
 0.476
COL2A1
Collagen alpha-1(II) chain isoform X1.
      
 0.475
LOC102735935
Putative ribosomal RNA methyltransferase 2-like.
   
    0.461
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.