STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCEAL5Transcription elongation factor A protein-like 5. (206 aa)    
Predicted Functional Partners:
BEX5
Protein BEX5 isoform X1.
   
  
 0.654
TCEAL1
Transcription elongation factor A protein-like 1.
   
 
 0.647
NGFRAP1
Protein BEX3 isoform X1.
   
  
 0.639
TGFB1
Transforming growth factor beta-1.
   
  0.602
ARMCX1
Armadillo repeat-containing X-linked protein 1.
   
 0.545
HMGA1
High mobility group protein HMG-I/HMG-Y isoform X1.
      
 0.543
PTPN11
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
    
 0.500
RAB9B
Ras-related protein Rab-9B isoform X1.
    
 0.496
ARMC10
Armadillo repeat-containing protein 10.
   
 0.467
FREM3
LOW QUALITY PROTEIN: FRAS1-related extracellular matrix protein 3.
    
 0.448
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.