STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102726204Thrombospondin type-1 domain-containing protein 7B-like. (1008 aa)    
Predicted Functional Partners:
RGL2
Ral guanine nucleotide dissociation stimulator-like 2.
      
 0.607
GTDC1
Glycosyltransferase-like domain-containing protein 1 isoform X1.
      
 0.565
WDR48
WD repeat-containing protein 48 isoform X1.
      
 0.549
LOC102727755
Latrophilin-3-like; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.507
MGAT5B
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B-like.
      
 0.501
PIANP
PILR alpha-associated neural protein.
      
 0.493
LOC102733513
Uncharacterized protein C12orf50 homolog.
      
 0.489
KRBA2
LOW QUALITY PROTEIN: KRAB-A domain-containing protein 2.
      
 0.487
SLAMF8
SLAM family member 8.
      
 0.487
KLHDC9
Kelch domain-containing protein 9.
      
 0.487
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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