STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC12A1Solute carrier family 12 member 1 isoform X2. (1100 aa)    
Predicted Functional Partners:
NPHS1
Nephrin.
      
 0.719
NPHS2
Podocin.
   
  
 0.673
SLC34A1
Sodium-dependent phosphate transport protein 2A.
   
 
 0.666
LOC102733211
Neuronal regeneration-related protein-like.
      
 0.611
LOC102736444
Uromodulin-like.
   
 0.579
KCNJ1
ATP-sensitive inward rectifier potassium channel 1 isoform X1.
   
  
 0.571
SLC3A1
Neutral and basic amino acid transport protein rBAT isoform X1.
   
 0.559
RBP5
Retinol-binding protein 5; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
     
 0.558
RNF38
RING finger protein 38 isoform X1.
      
 0.541
RNF44
RING finger protein 44 isoform X1.
      
 0.541
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.