STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF28Rho guanine nucleotide exchange factor 28. (1389 aa)    
Predicted Functional Partners:
LOC102737257
Rho-related GTP-binding protein RhoB-like.
   
 0.981
LOC102750030
Protein-tyrosine kinase 2-beta-like.
   
 
 0.899
LOC102745287
Rho-related GTP-binding protein RhoE-like.
   
 0.832
RND1
Rho-related GTP-binding protein Rho6.
   
 0.826
ARHGEF1
Rho guanine nucleotide exchange factor 1.
   
0.820
GNA11
Guanine nucleotide-binding protein subunit alpha-11.
    
 0.815
LOC102735079
Rho guanine nucleotide exchange factor 12-like.
   
0.808
ARHGEF12
Rho guanine nucleotide exchange factor 12-like.
   
0.808
RHOF
Rho-related GTP-binding protein RhoF.
   
 0.782
RAC2
Ras-related C3 botulinum toxin substrate 2.
   
 0.771
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.