STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FEM1CProtein fem-1 homolog C. (617 aa)    
Predicted Functional Partners:
LOC102740165
Neuritin-like.
      
 0.698
TCEB1
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 0.654
SNCG
Gamma-synuclein; Belongs to the synuclein family.
    
 0.645
SENP6
Sentrin-specific protease 6-like.
     
 0.637
RBX1
E3 ubiquitin-protein ligase RBX1 isoform X3.
    
 0.631
AAGAB
Alpha- and gamma-adaptin-binding protein p34 isoform X1.
      
 0.581
COMMD8
COMM domain-containing protein 8.
   
  0.553
SLC36A4
Proton-coupled amino acid transporter 4 isoform X1.
      
 0.546
SDR39U1
Epimerase family protein SDR39U1.
      
 0.544
DCUN1D1
DCN1-like protein.
    
 0.540
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.