STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRCC3Lys-63-specific deubiquitinase BRCC36 isoform X1. (316 aa)    
Predicted Functional Partners:
BRE
BRCA1-A complex subunit BRE.
    
 0.999
FAM175A
BRCA1-A complex subunit Abraxas.
    
 0.999
BABAM1
BRISC and BRCA1-A complex member 1.
    
 0.999
PSMD6
26S proteasome non-ATPase regulatory subunit 6 isoform X1.
   
 0.991
PSMD4
26S proteasome non-ATPase regulatory subunit 4.
   
 0.989
LOC102735127
26S protease regulatory subunit 4-like isoform X1; Belongs to the AAA ATPase family.
   
 0.989
PSMA3
Proteasome subunit alpha type.
   
 0.987
LOC102730851
26S protease regulatory subunit 6A-like.
   
 0.986
PSMC2
26S protease regulatory subunit 7; Belongs to the AAA ATPase family.
   
 0.984
PSMD7
26S proteasome non-ATPase regulatory subunit 7-like.
   
 0.984
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.