STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPDYCSpeedy protein C. (277 aa)    
Predicted Functional Partners:
CDK2
Cyclin-dependent kinase 2 isoform X1; Belongs to the protein kinase superfamily.
   
 0.916
LOC102725945
Cyclin-dependent kinase 1-like isoform X1; Belongs to the protein kinase superfamily.
   
 0.905
NFYB
Nuclear transcription factor Y subunit beta.
   
 0.894
LOC102747763
Speedy protein E4-like.
  
  
 
0.893
POLE3
DNA polymerase epsilon subunit 3.
    
 0.890
SPDYA
Speedy protein A.
  
  
 
0.800
RBM46
Probable RNA-binding protein 46 isoform X1.
      
 0.615
ZNF687
Zinc finger protein 687.
    
 
 0.610
CDK3
Cyclin-dependent kinase 3; Belongs to the protein kinase superfamily.
   
 0.589
GXYLT1
Glucoside xylosyltransferase 1 isoform X1.
      
 0.581
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.