STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN1SUN domain-containing protein 1. (471 aa)    
Predicted Functional Partners:
EMD
Emerin.
    
 
 0.991
CCDC79
Coiled-coil domain-containing protein 79.
    
 
 0.956
LMNB1
lamin-B1; Belongs to the intermediate filament family.
    
 0.906
SYNE4
Nesprin-4.
    
 0.901
LOC102739673
lamin-B receptor-like.
      
 0.875
LMNA
prelamin-A/C isoform X1; Belongs to the intermediate filament family.
    
 0.865
CDK2
Cyclin-dependent kinase 2 isoform X1; Belongs to the protein kinase superfamily.
    
 
 0.831
SPDYA
Speedy protein A.
    
 
 0.807
LOC102727354
Uncharacterized protein C15orf43 homolog.
      
 0.769
UNC119
Protein unc-119 homolog A.
      
 0.758
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.