STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF7RING-box protein 2 isoform X1. (113 aa)    
Predicted Functional Partners:
TCEB1
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
   
 0.995
LOC102742823
Cullin-5-like; Belongs to the cullin family.
    
 0.993
SKP1
S-phase kinase-associated protein 1 isoform X1; Belongs to the SKP1 family.
   
 0.958
CUL4A
LOW QUALITY PROTEIN: cullin 4A; Belongs to the cullin family.
    
 0.928
CUL1
Cullin-1; Belongs to the cullin family.
    
 0.914
DDB1
DNA damage-binding protein 1.
    
 0.911
UBE2F
NEDD8-conjugating enzyme UBE2F isoform X1; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.910
CACUL1
CDK2-associated and cullin domain-containing protein 1; Belongs to the cullin family.
    
 0.882
MRPL2
39S ribosomal protein L2, mitochondrial.
   
 0.875
LOC102749983
F-box/WD repeat-containing protein 11-like.
    
 0.874
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.