STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PADI3Protein-arginine deiminase type-3. (626 aa)    
Predicted Functional Partners:
VSIG8
V-set and immunoglobulin domain-containing protein 8.
      
 0.643
FOXN1
Forkhead box protein N1 isoform X1.
   
  
 0.624
LRRC15
Leucine-rich repeat-containing protein 15.
      
 0.543
KDELR3
ER lumen protein-retaining receptor.
      
 0.539
BLMH
Bleomycin hydrolase; Belongs to the peptidase C1 family.
      
 0.509
KRT82
Keratin, type II cuticular Hb2; Belongs to the intermediate filament family.
   
  
 0.508
RPTN
LOW QUALITY PROTEIN: repetin.
      
 0.493
LOC102726273
Homeobox protein MSX-2-like.
   
  
 0.493
PCOLCE
Procollagen C-endopeptidase enhancer 1.
      
 0.487
OVOL1
Putative transcription factor Ovo-like 1.
      
 0.487
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.