STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF10RING finger protein 10-like. (402 aa)    
Predicted Functional Partners:
LOC102728464
RING finger protein 10-like.
 
     0.950
LOC102744120
N-acylneuraminate cytidylyltransferase-like.
   
    0.801
PRKACA
cAMP-dependent protein kinase catalytic subunit alpha isoform X1; Belongs to the protein kinase superfamily.
   
    0.627
COPS5
LOW QUALITY PROTEIN: COP9 signalosome subunit 5.
      
 0.626
CNPY2
Protein canopy homolog 2 isoform X1.
      
 0.601
COQ5
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2).
      
 0.581
CCDC64
Bicaudal D-related protein 1.
      
 0.542
BBOX1
Gamma-butyrobetaine dioxygenase.
      
 0.485
LRP12
Low-density lipoprotein receptor-related protein 12 isoform X1.
      
 0.482
LRP10
Low-density lipoprotein receptor-related protein 10.
      
 0.482
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.