STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAPBPLTapasin-related protein isoform X2. (437 aa)    
Predicted Functional Partners:
LOC102733853
Antigen peptide transporter 2-like.
   
  
 0.679
TAP1
Antigen peptide transporter 1.
   
  
 0.596
PSMB10
Proteasome subunit beta.
   
  
 0.501
PSME1
Proteasome activator complex subunit 1 isoform X1.
   
  
 0.499
PSME2
Proteasome activator complex subunit 2 isoform X1.
   
  
 0.494
TMEM8B
Transmembrane protein 8B.
      
 0.474
LOC102735509
Oxysterol-binding protein-related protein 7-like.
      
 0.470
C2CD2L
C2 domain-containing protein 2-like.
      
 0.470
FAM198B
Protein FAM198B.
      
 0.451
LOC102744304
EP300-interacting inhibitor of differentiation 2-like.
      
 0.439
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.