STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102747971All-trans-retinol 13,14-reductase-like. (345 aa)    
Predicted Functional Partners:
FDFT1
Squalene synthase isoform X1.
  
 
 0.970
LOC102732890
All-trans-retinol 13,14-reductase-like.
 
     0.950
LRAT
Lecithin retinol acyltransferase.
     
 0.947
ADH4
Alcohol dehydrogenase 4.
   
 
 0.925
RDH12
Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.923
LOC102729066
Alcohol dehydrogenase E chain-like.
   
 
 0.899
HSD17B6
17-beta-hydroxysteroid dehydrogenase type 6; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.896
RDH10
Retinol dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.893
SDR16C5
Epidermal retinol dehydrogenase 2; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.893
LOC102744781
LOW QUALITY PROTEIN: retinol dehydrogenase 8-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.893
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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