STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SETD1AHistone-lysine N-methyltransferase SETD1A-like. (1384 aa)    
Predicted Functional Partners:
LOC102730119
set1/Ash2 histone methyltransferase complex subunit ASH2-like.
    
 0.965
LOC102739262
Histone-lysine N-methyltransferase SETD1A-like.
 
   
  0.933
DPY30
Protein dpy-30 homolog isoform X1.
    
 0.932
CXXC1
cpG-binding protein isoform X2.
   
 0.932
LOC102738874
Host cell factor 1-like.
   
 0.806
CAMKMT
Calmodulin-lysine N-methyltransferase.
     
 0.803
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
    
 0.798
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 isoform X1.
    
  0.795
IZUMO4
Izumo sperm-egg fusion protein 4 isoform X1.
   
 0.775
UBA52
ubiquitin-60S ribosomal protein L40 isoform X3.
    
  0.767
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.