STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102729847Transmembrane protein C16orf54 homolog. (224 aa)    
Predicted Functional Partners:
ASPHD1
Aspartate beta-hydroxylase domain-containing protein 1.
      
 0.769
QPRT
Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family.
      
 0.769
CDIPT
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
      
 0.743
LOC102742081
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1-like.
      
 0.662
CHTOP
Chromatin target of PRMT1 protein.
      
 0.617
TAOK1
Serine/threonine-protein kinase TAO1.
      
 0.581
LOC102728502
Serine/threonine-protein kinase TAO2-like.
      
 0.581
PDZD9
PDZ domain-containing protein 9.
      
 0.580
STRADB
STE20-related kinase adapter protein beta.
      
 0.543
YPEL3
Protein yippee-like; Belongs to the yippee family.
      
 0.539
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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